SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b.
Identifieur interne : 001C65 ( Main/Exploration ); précédent : 001C64; suivant : 001C66SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b.
Auteurs : Bhavna Varshney [Inde] ; Sudhakar Agnihothram ; Sudhakar Agnihotram ; Yee-Joo Tan ; Ralph Baric ; Sunil K. LalSource :
- PloS one [ 1932-6203 ] ; 2012.
Descripteurs français
- KwdFr :
- ARN messager (génétique), ARN messager (métabolisme), Activation de la transcription (génétique), Activation enzymatique, Animaux, Chimiokine CCL3 (génétique), Chimiokine CCL3 (métabolisme), Extracellular Signal-Regulated MAP Kinases (métabolisme), Humains, Interleukine-2 (génétique), Liaison aux protéines, Lignée cellulaire, Noyau de la cellule (métabolisme), Phosphorylation, Protéines virales non structurales (métabolisme), Protéines virales régulatrices ou accessoires (métabolisme), Régions promotrices (génétique) (génétique), Sites de fixation, Souris, Sous-unité alpha 2 du facteur CBF (génétique), Sous-unité alpha 2 du facteur CBF (métabolisme), Transcription génétique, Virus du SRAS (métabolisme).
- MESH :
- génétique : ARN messager, Activation de la transcription, Chimiokine CCL3, Interleukine-2, Régions promotrices (génétique), Sous-unité alpha 2 du facteur CBF.
- métabolisme : ARN messager, Chimiokine CCL3, Extracellular Signal-Regulated MAP Kinases, Noyau de la cellule, Protéines virales non structurales, Protéines virales régulatrices ou accessoires, Sous-unité alpha 2 du facteur CBF, Virus du SRAS.
- Activation enzymatique, Animaux, Humains, Liaison aux protéines, Lignée cellulaire, Phosphorylation, Sites de fixation, Souris, Transcription génétique.
English descriptors
- KwdEn :
- Animals, Binding Sites, Cell Line, Cell Nucleus (metabolism), Chemokine CCL3 (genetics), Chemokine CCL3 (metabolism), Core Binding Factor Alpha 2 Subunit (genetics), Core Binding Factor Alpha 2 Subunit (metabolism), Enzyme Activation, Extracellular Signal-Regulated MAP Kinases (metabolism), Humans, Interleukin-2 (genetics), Mice, Phosphorylation, Promoter Regions, Genetic (genetics), Protein Binding, RNA, Messenger (genetics), RNA, Messenger (metabolism), SARS Virus (metabolism), Transcription, Genetic, Transcriptional Activation (genetics), Viral Nonstructural Proteins (metabolism), Viral Regulatory and Accessory Proteins (metabolism).
- MESH :
- chemical , genetics : Chemokine CCL3, Core Binding Factor Alpha 2 Subunit, Interleukin-2, RNA, Messenger.
- genetics : Promoter Regions, Genetic, Transcriptional Activation.
- metabolism : Cell Nucleus, Chemokine CCL3, Core Binding Factor Alpha 2 Subunit, Extracellular Signal-Regulated MAP Kinases, RNA, Messenger, SARS Virus, Viral Nonstructural Proteins, Viral Regulatory and Accessory Proteins.
- Animals, Binding Sites, Cell Line, Enzyme Activation, Humans, Mice, Phosphorylation, Protein Binding, Transcription, Genetic.
Abstract
The causative agent of severe acute respiratory syndrome, SARS coronavirus (SARS-CoV) genome encodes several unique group specific accessory proteins with unknown functions. Among them, accessory protein 3b (also known as ORF4) was lately identified as one of the viral interferon antagonist. Recently our lab uncovered a new role for 3b in upregulation of AP-1 transcriptional activity and its downstream genes. Thus, we believe that 3b might play an important role in SARS-CoV pathogenesis and therefore is of considerable interest. The current study aims at identifying novel host cellular interactors of the 3b protein.
DOI: 10.1371/journal.pone.0029542
PubMed: 22253733
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 001417
- to stream PubMed, to step Curation: 001417
- to stream PubMed, to step Checkpoint: 001295
- to stream Ncbi, to step Merge: 002440
- to stream Ncbi, to step Curation: 002440
- to stream Ncbi, to step Checkpoint: 002440
- to stream Main, to step Merge: 001C80
- to stream Main, to step Curation: 001C65
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b.</title>
<author><name sortKey="Varshney, Bhavna" sort="Varshney, Bhavna" uniqKey="Varshney B" first="Bhavna" last="Varshney">Bhavna Varshney</name>
<affiliation wicri:level="1"><nlm:affiliation>Virology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.</nlm:affiliation>
<country xml:lang="fr">Inde</country>
<wicri:regionArea>Virology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi</wicri:regionArea>
<wicri:noRegion>New Delhi</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Agnihothram, Sudhakar" sort="Agnihothram, Sudhakar" uniqKey="Agnihothram S" first="Sudhakar" last="Agnihothram">Sudhakar Agnihothram</name>
</author>
<author><name sortKey="Agnihotram, Sudhakar" sort="Agnihotram, Sudhakar" uniqKey="Agnihotram S" first="Sudhakar" last="Agnihotram">Sudhakar Agnihotram</name>
</author>
<author><name sortKey="Tan, Yee Joo" sort="Tan, Yee Joo" uniqKey="Tan Y" first="Yee-Joo" last="Tan">Yee-Joo Tan</name>
</author>
<author><name sortKey="Baric, Ralph" sort="Baric, Ralph" uniqKey="Baric R" first="Ralph" last="Baric">Ralph Baric</name>
</author>
<author><name sortKey="Lal, Sunil K" sort="Lal, Sunil K" uniqKey="Lal S" first="Sunil K" last="Lal">Sunil K. Lal</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2012">2012</date>
<idno type="RBID">pubmed:22253733</idno>
<idno type="pmid">22253733</idno>
<idno type="doi">10.1371/journal.pone.0029542</idno>
<idno type="wicri:Area/PubMed/Corpus">001417</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001417</idno>
<idno type="wicri:Area/PubMed/Curation">001417</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001417</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001295</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001295</idno>
<idno type="wicri:Area/Ncbi/Merge">002440</idno>
<idno type="wicri:Area/Ncbi/Curation">002440</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">002440</idno>
<idno type="wicri:Area/Main/Merge">001C80</idno>
<idno type="wicri:Area/Main/Curation">001C65</idno>
<idno type="wicri:Area/Main/Exploration">001C65</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b.</title>
<author><name sortKey="Varshney, Bhavna" sort="Varshney, Bhavna" uniqKey="Varshney B" first="Bhavna" last="Varshney">Bhavna Varshney</name>
<affiliation wicri:level="1"><nlm:affiliation>Virology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.</nlm:affiliation>
<country xml:lang="fr">Inde</country>
<wicri:regionArea>Virology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi</wicri:regionArea>
<wicri:noRegion>New Delhi</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Agnihothram, Sudhakar" sort="Agnihothram, Sudhakar" uniqKey="Agnihothram S" first="Sudhakar" last="Agnihothram">Sudhakar Agnihothram</name>
</author>
<author><name sortKey="Agnihotram, Sudhakar" sort="Agnihotram, Sudhakar" uniqKey="Agnihotram S" first="Sudhakar" last="Agnihotram">Sudhakar Agnihotram</name>
</author>
<author><name sortKey="Tan, Yee Joo" sort="Tan, Yee Joo" uniqKey="Tan Y" first="Yee-Joo" last="Tan">Yee-Joo Tan</name>
</author>
<author><name sortKey="Baric, Ralph" sort="Baric, Ralph" uniqKey="Baric R" first="Ralph" last="Baric">Ralph Baric</name>
</author>
<author><name sortKey="Lal, Sunil K" sort="Lal, Sunil K" uniqKey="Lal S" first="Sunil K" last="Lal">Sunil K. Lal</name>
</author>
</analytic>
<series><title level="j">PloS one</title>
<idno type="eISSN">1932-6203</idno>
<imprint><date when="2012" type="published">2012</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term>
<term>Binding Sites</term>
<term>Cell Line</term>
<term>Cell Nucleus (metabolism)</term>
<term>Chemokine CCL3 (genetics)</term>
<term>Chemokine CCL3 (metabolism)</term>
<term>Core Binding Factor Alpha 2 Subunit (genetics)</term>
<term>Core Binding Factor Alpha 2 Subunit (metabolism)</term>
<term>Enzyme Activation</term>
<term>Extracellular Signal-Regulated MAP Kinases (metabolism)</term>
<term>Humans</term>
<term>Interleukin-2 (genetics)</term>
<term>Mice</term>
<term>Phosphorylation</term>
<term>Promoter Regions, Genetic (genetics)</term>
<term>Protein Binding</term>
<term>RNA, Messenger (genetics)</term>
<term>RNA, Messenger (metabolism)</term>
<term>SARS Virus (metabolism)</term>
<term>Transcription, Genetic</term>
<term>Transcriptional Activation (genetics)</term>
<term>Viral Nonstructural Proteins (metabolism)</term>
<term>Viral Regulatory and Accessory Proteins (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ARN messager (génétique)</term>
<term>ARN messager (métabolisme)</term>
<term>Activation de la transcription (génétique)</term>
<term>Activation enzymatique</term>
<term>Animaux</term>
<term>Chimiokine CCL3 (génétique)</term>
<term>Chimiokine CCL3 (métabolisme)</term>
<term>Extracellular Signal-Regulated MAP Kinases (métabolisme)</term>
<term>Humains</term>
<term>Interleukine-2 (génétique)</term>
<term>Liaison aux protéines</term>
<term>Lignée cellulaire</term>
<term>Noyau de la cellule (métabolisme)</term>
<term>Phosphorylation</term>
<term>Protéines virales non structurales (métabolisme)</term>
<term>Protéines virales régulatrices ou accessoires (métabolisme)</term>
<term>Régions promotrices (génétique) (génétique)</term>
<term>Sites de fixation</term>
<term>Souris</term>
<term>Sous-unité alpha 2 du facteur CBF (génétique)</term>
<term>Sous-unité alpha 2 du facteur CBF (métabolisme)</term>
<term>Transcription génétique</term>
<term>Virus du SRAS (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Chemokine CCL3</term>
<term>Core Binding Factor Alpha 2 Subunit</term>
<term>Interleukin-2</term>
<term>RNA, Messenger</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Promoter Regions, Genetic</term>
<term>Transcriptional Activation</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN messager</term>
<term>Activation de la transcription</term>
<term>Chimiokine CCL3</term>
<term>Interleukine-2</term>
<term>Régions promotrices (génétique)</term>
<term>Sous-unité alpha 2 du facteur CBF</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Nucleus</term>
<term>Chemokine CCL3</term>
<term>Core Binding Factor Alpha 2 Subunit</term>
<term>Extracellular Signal-Regulated MAP Kinases</term>
<term>RNA, Messenger</term>
<term>SARS Virus</term>
<term>Viral Nonstructural Proteins</term>
<term>Viral Regulatory and Accessory Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ARN messager</term>
<term>Chimiokine CCL3</term>
<term>Extracellular Signal-Regulated MAP Kinases</term>
<term>Noyau de la cellule</term>
<term>Protéines virales non structurales</term>
<term>Protéines virales régulatrices ou accessoires</term>
<term>Sous-unité alpha 2 du facteur CBF</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Binding Sites</term>
<term>Cell Line</term>
<term>Enzyme Activation</term>
<term>Humans</term>
<term>Mice</term>
<term>Phosphorylation</term>
<term>Protein Binding</term>
<term>Transcription, Genetic</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Activation enzymatique</term>
<term>Animaux</term>
<term>Humains</term>
<term>Liaison aux protéines</term>
<term>Lignée cellulaire</term>
<term>Phosphorylation</term>
<term>Sites de fixation</term>
<term>Souris</term>
<term>Transcription génétique</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The causative agent of severe acute respiratory syndrome, SARS coronavirus (SARS-CoV) genome encodes several unique group specific accessory proteins with unknown functions. Among them, accessory protein 3b (also known as ORF4) was lately identified as one of the viral interferon antagonist. Recently our lab uncovered a new role for 3b in upregulation of AP-1 transcriptional activity and its downstream genes. Thus, we believe that 3b might play an important role in SARS-CoV pathogenesis and therefore is of considerable interest. The current study aims at identifying novel host cellular interactors of the 3b protein.</div>
</front>
</TEI>
<affiliations><list><country><li>Inde</li>
</country>
</list>
<tree><noCountry><name sortKey="Agnihothram, Sudhakar" sort="Agnihothram, Sudhakar" uniqKey="Agnihothram S" first="Sudhakar" last="Agnihothram">Sudhakar Agnihothram</name>
<name sortKey="Agnihotram, Sudhakar" sort="Agnihotram, Sudhakar" uniqKey="Agnihotram S" first="Sudhakar" last="Agnihotram">Sudhakar Agnihotram</name>
<name sortKey="Baric, Ralph" sort="Baric, Ralph" uniqKey="Baric R" first="Ralph" last="Baric">Ralph Baric</name>
<name sortKey="Lal, Sunil K" sort="Lal, Sunil K" uniqKey="Lal S" first="Sunil K" last="Lal">Sunil K. Lal</name>
<name sortKey="Tan, Yee Joo" sort="Tan, Yee Joo" uniqKey="Tan Y" first="Yee-Joo" last="Tan">Yee-Joo Tan</name>
</noCountry>
<country name="Inde"><noRegion><name sortKey="Varshney, Bhavna" sort="Varshney, Bhavna" uniqKey="Varshney B" first="Bhavna" last="Varshney">Bhavna Varshney</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001C65 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001C65 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= SrasV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:22253733 |texte= SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:22253733" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a SrasV1
This area was generated with Dilib version V0.6.33. |